PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON93643.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 91aa    MW: 10298.5 Da    PI: 8.5255
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON93643.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.66.3e-1019591454
                HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                d+iN+  ++L++llP+ +   +s K+s a +L+++++YI+sL
  PON93643.1 19 DQINDLVSKLQQLLPEiR-ERRSDKVSAANVLQETCNYIRSL 59
                79**************77.99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MSSRRSRSRQ SGGSRITDDQ INDLVSKLQQ LLPEIRERRS DKVSAANVLQ ETCNYIRSLH  60
REVDDLSERL SELLATTDTA QAAIIRSLLS Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74500.11e-39bHLH family protein