PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON93626.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TCP

Protein Properties

Length: 438aa MW: 46456.7 Da PI: 7.4095

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON93626.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	133.2	2.3e-41	91	234	2	112
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ PON93626.1 91 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSIPsqlrpsyynpn 189 789******************************************************************999888888888887777777778888888 PP TCP 89 ..............................kaaksaakskksqksaasalnlak 112 + ++++s+a+ ln++ PON93626.1 190 fsvqaarrstsslfsgiglsptsdnhnnnsN---------DNNNSTATLLNFQS 234 8888888888888888887654333333332.........33333333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MEGGDDFHHH HPHHHHHHQH HNRPNFPFQL LEKKEEEASC TSSSTAYPSL AISASTDPNT 60 TSCSTSTNTT STTIAASAAA AAAETSSKKP PPKRTSTKDR HTKVDGRGRR IRMPALCAAR 120 VFQLTRELGH KSDGETIEWL LQQAEPAVIA ATGTGTIPAN FTSLNISLRS SGSSMSIPSQ 180 LRPSYYNPNF SVQAARRSTS SLFSGIGLSP TSDNHNNNSN DNNNSTATLL NFQSPASAVN 240 FHPMLQAKQE LRDAATTSLE LSEAAAGEDG MGRNKRRQAA EQELGQMGGY LLQSTGAAGA 300 VPASHHHGGQ IPANFWMVAN SNSQVMSGHH DPIWAFNPAV NNSGLYRGTM SSGLHFMNFP 360 TPFALMPSQQ LGSNDGGGVG VGGGNNMSGG DAHLNMLTSL NPYRHVSGTG VSDSQASGSH 420 SHHGGGDDRH DTNSTHHS

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MEGGDDFHHH HPHHHHHHQH HNRPNFPFQL LEKKEEEASC TSSSTAYPSL AISASTDPNT  60
TSCSTSTNTT STTIAASAAA AAAETSSKKP PPKRTSTKDR HTKVDGRGRR IRMPALCAAR  120
VFQLTRELGH KSDGETIEWL LQQAEPAVIA ATGTGTIPAN FTSLNISLRS SGSSMSIPSQ  180
LRPSYYNPNF SVQAARRSTS SLFSGIGLSP TSDNHNNNSN DNNNSTATLL NFQSPASAVN  240
FHPMLQAKQE LRDAATTSLE LSEAAAGEDG MGRNKRRQAA EQELGQMGGY LLQSTGAAGA  300
VPASHHHGGQ IPANFWMVAN SNSQVMSGHH DPIWAFNPAV NNSGLYRGTM SSGLHFMNFP  360
TPFALMPSQQ LGSNDGGGVG VGGGNNMSGG DAHLNMLTSL NPYRHVSGTG VSDSQASGSH  420
SHHGGGDDRH DTNSTHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	1e-46	TCP family protein