PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON93510.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family TCP
Protein Properties Length: 433aa    MW: 47429.1 Da    PI: 9.3685
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON93510.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1424.5e-441352982137
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssa..sec.eaesssssasn 84 
                 + kkdrhski+T++g+RdRRvRls+e+a++fFdL d+LGfdk+skt+eWLl+++k+aikel +t             s   +  sec e          
  PON93510.1 135 PCKKDRHSKIYTAQGLRDRRVRLSIEIAREFFDLHDMLGFDKASKTLEWLLTKSKKAIKELSRTklscssrstkislS---SttSECeE---------- 220
                 679*************************************************************66655444444321...02234432.......... PP

         TCP  85 sssg............................kaaksaakskksqksaasalnlakesrakarararertrekmriknkln 137
                    +                            +++  + ++++ +k  ++    akesrakararar rt+ek    n++n
  PON93510.1 221 ---AavsevneavdrinvendrnlggggggggAERVLSISKSDLEKFMSEGVVAAKESRAKARARARARTKEKRYCYNNNN 298
                 ...12222233334445777888999999997555555577777777777789999****************987776665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    
PFPQYYFPST SSSSSYPPPP PPLPPPPPPP PLLVNQDPNS SCVDNNIFLH QNLNHSHFDQ  60
IPLPTPFLLT NNNNNNNNTI IPQILIPEAL INLGVSNSTT PPPLMMTNKA HEDHISSGSS  120
LNLHGLGPNF VPKKPCKKDR HSKIYTAQGL RDRRVRLSIE IAREFFDLHD MLGFDKASKT  180
LEWLLTKSKK AIKELSRTKL SCSSRSTKIS LSSTTSECEE AAVSEVNEAV DRINVENDRN  240
LGGGGGGGGA ERVLSISKSD LEKFMSEGVV AAKESRAKAR ARARARTKEK RYCYNNNNST  300
TKRSSTSTTT TSASITTSTT VPCLSSAQIL NQFRSPNFIS ETGPSSLGLD DHHNQSVVIK  360
RSKLKLFPGS ISSATTHHDE HHQHQHQEHF CGISKGESSN HIIYSPTTLL PQNWDTNGAA  420
TVSGRPGFRE PST
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1276285RAKARARARA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.25e-29TCP family protein