PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON93442.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ZF-HD
Protein Properties Length: 372aa    MW: 41271.6 Da    PI: 7.2881
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON93442.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer98.84e-31114169460
  ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  vrY+eClkNhAa  Gg+++DGCgEfmps geeg+ +alkCaAC+CHRnFHR+e + e
   PON93442.1 114 VRYRECLKNHAALSGGNVYDGCGEFMPS-GEEGSLEALKCAACQCHRNFHRKEIDGE 169
                  89*************************9.999********************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MEFKAQENEM RTSPGSLSYT HLSKEGGERR SRSVLNASHN NNNQHHDHHN GSANINCTTA  60
TQTLDPPRPN FQHHQTLHGS RDPDPDRVTT KITLSPGGAS AKSSSKTTQS SAIVRYRECL  120
KNHAALSGGN VYDGCGEFMP SGEEGSLEAL KCAACQCHRN FHRKEIDGES QLLYSPSSRR  180
ASSTTTNTTA LMLNPLQLPP PLPSPSSLHH HHNHHHPHHK YFNHAPPIIQ PMNVAFGGGG  240
CGGNESSSED LNVYGSTEAV AVPAVPFALS KKRFRTKFTQ EQKDKMLEFA EKVGWRFQKQ  300
DEEEVARFCA EVGVKRQVLK VWMHNNKSTM KLKQQQENVN MVVNNNNMSS NDLMDEVSHD  360
HDEAVEEGGL DT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.11e-33ZF-HD family protein