PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON93394.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 474aa MW: 51174.6 Da PI: 8.3898

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON93394.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14	9e-05	364	402	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L++l+ + +K + a++L +A+ YIk Lq PON93394.1 364 RKEKLGDRIAALQQLVSPF-----GKTDTASVLMEAIGYIKFLQ 402 7788899*******998.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MESANLRHQR QLPDQLVGSP PALAAPSCYG FGSSANHAWS SSPTTTTTAT STFTSYGNSN 60 PNYDGIVSNS RESNITTRNN VKGHHHDHHH NINLASGPLK YSSNTVNDLG FPWTSDESYT 120 GSSSTCTTAQ SAYDMHLAKI KEEFSESLIP KFTEMLNGRS STNNDDYYGH FFLKNERRDL 180 MSSTAATTTT TTTENLLVKA LSSSQINGNQ FSADSEFDSN NIVNGTSSTS FGGLLAVGCR 240 GQFSQIYPSI NVSNLNSQSS SSTISASSLG ISCSISTQPL NDNINLGVLR GSRSNHFGGL 300 LDEMHQPHSL SCGHGKGISS FNSEITEAKR PPGSTMEPKT TQSAASNKKP RLESRTTCPP 360 FKVRKEKLGD RIAALQQLVS PFGKTDTASV LMEAIGYIKF LQNQVETLSV PYMKSSRNKS 420 NKPMQRGLKE DGSEESKRDL RSRGLCLVPL SCMSYVTGDG GGSMWPPPHF GGRA

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MESANLRHQR QLPDQLVGSP PALAAPSCYG FGSSANHAWS SSPTTTTTAT STFTSYGNSN  60
PNYDGIVSNS RESNITTRNN VKGHHHDHHH NINLASGPLK YSSNTVNDLG FPWTSDESYT  120
GSSSTCTTAQ SAYDMHLAKI KEEFSESLIP KFTEMLNGRS STNNDDYYGH FFLKNERRDL  180
MSSTAATTTT TTTENLLVKA LSSSQINGNQ FSADSEFDSN NIVNGTSSTS FGGLLAVGCR  240
GQFSQIYPSI NVSNLNSQSS SSTISASSLG ISCSISTQPL NDNINLGVLR GSRSNHFGGL  300
LDEMHQPHSL SCGHGKGISS FNSEITEAKR PPGSTMEPKT TQSAASNKKP RLESRTTCPP  360
FKVRKEKLGD RIAALQQLVS PFGKTDTASV LMEAIGYIKF LQNQVETLSV PYMKSSRNKS  420
NKPMQRGLKE DGSEESKRDL RSRGLCLVPL SCMSYVTGDG GGSMWPPPHF GGRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	3e-59	bHLH family protein