PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON93286.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 281aa    MW: 30085.3 Da    PI: 6.0611
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON93286.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.5e-11162209455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  PON93286.1 162 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 209
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MDPPLINESS FSAANPSAYS LAEIWPFGGE PGGVSGLGLR MGHMGQNPSG LGESSGNRDG  60
SMEESTVTEQ SGGGGGRKRR DVSSEDESSK MVSTSSANEL NNSNGKRTKL AGSKHENGGS  120
KADAEASSVV GDKPAEQASK PSEPPKQDYI HVRARRGQAT DSHSLAERAR REKISERMKI  180
LQDLVPGCNK VIGKALVLDE IINYIQSLQR QVEFLSMKLE TVNSRMNLNP TIEGFSSKDL  240
GLQAFDAAGL LFGSQAPRDY AQGSQAEWLH MQVGGSFERQ T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.14e-94bHLH family protein