PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON93257.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MYB_related
Protein Properties Length: 75aa    MW: 8536.24 Da    PI: 4.3681
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON93257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.81.6e-102668145
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++ ++++E+ l+ + +++ G + W++Ia +++ gRt++++  +w 
       PON93257.1 26 KLEFSEDEEALITRMFNLVGER-WTLIAGRIP-GRTAEEIEKYWT 68
                     678*******************.*********.***********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    
MADFTHSSSD DSSAHSTAEE SSKESKLEFS EDEEALITRM FNLVGERWTL IAGRIPGRTA  60
EEIEKYWTTR YSTSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01380.12e-15MYB_related family protein