PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON93207.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GRAS
Protein Properties Length: 602aa    MW: 67989.2 Da    PI: 4.7269
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON93207.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS294.13.6e-902266001374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalkl....fsevsPilkf 93 
                 lvelLl+ Ae v  ++ e a++lL+    l  s++g+p+qR++ yf eAL++r+ r ++ +++k l  + +s  ++++++++  +    f++  P+ ++
  PON93207.1 226 LVELLLASAEKVGGQQYESASRLLNFFDYLaPSSTGNPVQRVVYYFIEALKERIDReTGRNTSKGLGKNLAS-FDMDKAMMVPDApklaFHQGLPFSQV 323
                 689***************************778999********************6677777777444333.4444544444334448********** PP

        GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                   ++  qaI e v+++++vH+iD+ i +G+QW+aL+qaLasR e  p   +++T+v+    +sk+ +eetg+ L++fA++l++pf+f++++++++ +l+
  PON93207.1 324 EKFAGIQAIIENVSESNKVHVIDLRIAYGVQWIALMQALASRHEYCPieLFKVTAVAT---TSKHVMEETGKWLSNFADTLKIPFNFKIVMVSDMFELK 419
                 *******************************************77665589*******...689*********************************** PP

        GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErel 289
                  + ++++++E++aV ++++l  + +++++les    ++++++sl+P v+vv+e +a+hns+ F++rf+eal +y +lfdsle+ + r++ +r+ vE ++
  PON93207.1 420 EDLFELDEDETIAVYSSYALRGMISQPAQLES----LMRVIRSLNPCVMVVTEVDANHNSPVFVNRFIEALFFYGTLFDSLESFMNRDEPNRMAVEGKY 514
                 ************************99999999....*************************************************************** PP

        GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                   ++i+n+va+eg+er+ r+ +   Wr+ + ++G+++++ls +   qakl+++ ++ +d  ++  + +++++gWk+ p +s+S+W+
  PON93207.1 515 CFQAIRNIVATEGEERTIRNVKIDVWRAFFARFGMEELKLSPSSIYQAKLIVKSFPcGDSCTLSMNGKCMMIGWKGTPHTSLSVWK 600
                 *************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 602 aa     Download sequence    
MDFPFDSMFS SGDFSFEGID QDRFSSTDRS LNNSMENVQF YGAGEYRGNP VGIPSLYPDY  60
GYCPDEYLGE GFIFSKSLLQ EQQQQQQSFS VYELFDDIPQ YGLVLPPFEA CLEDITKPGE  120
IPTVIPAVGA KKDKEYPRSL AALELLNNHG NGFKRLRGER VIQPSNDLTT FNDRQVAADC  180
RTLSTEDILR FAGARFIQSY SQQTASHPFE GSFSGLSQEQ TKDVELVELL LASAEKVGGQ  240
QYESASRLLN FFDYLAPSST GNPVQRVVYY FIEALKERID RETGRNTSKG LGKNLASFDM  300
DKAMMVPDAP KLAFHQGLPF SQVEKFAGIQ AIIENVSESN KVHVIDLRIA YGVQWIALMQ  360
ALASRHEYCP IELFKVTAVA TTSKHVMEET GKWLSNFADT LKIPFNFKIV MVSDMFELKE  420
DLFELDEDET IAVYSSYALR GMISQPAQLE SLMRVIRSLN PCVMVVTEVD ANHNSPVFVN  480
RFIEALFFYG TLFDSLESFM NRDEPNRMAV EGKYCFQAIR NIVATEGEER TIRNVKIDVW  540
RAFFARFGME ELKLSPSSIY QAKLIVKSFP CGDSCTLSMN GKCMMIGWKG TPHTSLSVWK  600
FL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.15e-49GRAS family protein