PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON93155.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 490aa MW: 54416.3 Da PI: 6.7153

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON93155.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107.9	5e-34	291	349	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s+fprsYYrCtsagC vkk+vers++dp++v++tYeg+H+h+ PON93155.1 291 LDDGYRWRKYGQKAVKNSPFPRSYYRCTSAGCGVKKRVERSSDDPTIVVTTYEGQHTHP 349 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MVSMDKKDQA KEKENSIMAN SATSASASIF SSDDFNPTNF FSLFDTNNTN YNNIYNNYYY 60 YANNNSTIVM PPPPPPPPPP YTTTSTSNTQ NHHQHHQDHH EEAEKAPSSS SSALGFMDLL 120 GISQDFGSSL FDLPPLPPPP SPPPPPPPSS TNNNDDDHDN DMMRPVVLVL PPRQTTPSSS 180 PPLPSPASST VLPEISTTSE VLNSTTAPTT PNSSSLSSSS NDERQQKLLQ VNANPDHGHQ 240 EEEEAEQDPD QKAQNHNNNN NNKQLKPKKK NQKRQREPRF AFMTKSEVDH LDDGYRWRKY 300 GQKAVKNSPF PRSYYRCTSA GCGVKKRVER SSDDPTIVVT TYEGQHTHPC PVTPRGAIGI 360 SPSAAVESGA FVSHFGGAMP MLSSSAQQHH NQFHHHHQQQ QQQYHHHHQQ HQHHSPYMYN 420 SSTPSLSISS NSTNSGLLPS FVQERSHKYG NYNNVAVTSS SASSSLVMRD HGLLQDIVPT 480 QMRKEEDQID

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MVSMDKKDQA KEKENSIMAN SATSASASIF SSDDFNPTNF FSLFDTNNTN YNNIYNNYYY  60
YANNNSTIVM PPPPPPPPPP YTTTSTSNTQ NHHQHHQDHH EEAEKAPSSS SSALGFMDLL  120
GISQDFGSSL FDLPPLPPPP SPPPPPPPSS TNNNDDDHDN DMMRPVVLVL PPRQTTPSSS  180
PPLPSPASST VLPEISTTSE VLNSTTAPTT PNSSSLSSSS NDERQQKLLQ VNANPDHGHQ  240
EEEEAEQDPD QKAQNHNNNN NNKQLKPKKK NQKRQREPRF AFMTKSEVDH LDDGYRWRKY  300
GQKAVKNSPF PRSYYRCTSA GCGVKKRVER SSDDPTIVVT TYEGQHTHPC PVTPRGAIGI  360
SPSAAVESGA FVSHFGGAMP MLSSSAQQHH NQFHHHHQQQ QQQYHHHHQQ HQHHSPYMYN  420
SSTPSLSISS NSTNSGLLPS FVQERSHKYG NYNNVAVTSS SASSSLVMRD HGLLQDIVPT  480
QMRKEEDQID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49520.1	2e-49	WRKY family protein