PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON93004.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 333aa    MW: 36210 Da    PI: 7.0848
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON93004.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.6e-181867356
         AP2  3 ykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                + GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a++ a+++l+g+
  PON93004.1 18 FVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDDAARALRGA 67
                89******.7*********....4456*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MTSGCRRKSS SSRGHQRFVG VRQRPSGRWV AEIKDSLQKV RLWLGTFDTA EDAARAYDDA  60
ARALRGANAR TNFELPAAAS HHHNQYHANL EPFSFEQVSA GSASTGVETE GLLGALKAKL  120
FDGDAKPTRA SLLFPLRAKP LVPQQYHQNH HKMTTSTTSP SPSHDHHDVI VLRDHDLVGL  180
GVHHQLPAAT STSLVWSNNE AQPSYPDQVL PSIINHNNIH MNVNAASSGD HWPLLSAAAT  240
KTSVSLNYTS NNNSSINPDE IMVHPITSFN NNNDDISGTH QGLCYCSLSH DQQFVVYDNN  300
VTAALLGGSS TNSITTSTTG PWDPLFYMSS VLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.16e-16ERF family protein