PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON92842.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MYB | ||||||||
Protein Properties | Length: 302aa MW: 34227.4 Da PI: 8.4094 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.6 | 1.1e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed llv++++ +G g+W++ +++ g+ R++k+c++rw +yl PON92842.1 14 RGPWTPREDSLLVNYIQHYGEGHWRSLPKKAGLLRCGKSCRLRWMNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 52.8 | 8.9e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T++Ed+l+++++ +lG++ W++Ia +++ gRt++++k++w+++l PON92842.1 67 RGNITPDEDDLIIRLHSLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 112 7999******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MGRTPCCSQV GLRRGPWTPR EDSLLVNYIQ HYGEGHWRSL PKKAGLLRCG KSCRLRWMNY 60 LRPDIKRGNI TPDEDDLIIR LHSLLGNRWS LIAGRLPGRT DNEIKNYWNS HLSKRLKNDT 120 TTTTTTTTTT TTVDKRHTNY HGRNPKGTSK SSEKSTKKPS TEKNNRDGAN CEQEVIAKTK 180 IYLPKPIRVG QFSSIKNDGF DAGSNSMPSF LDNVHGQDCT EVLNLDHVFK PGVDQGGNAG 240 GGDPLLCVKD HDFANNIIDR RCESISCHDF SQQKDDMLDK IYEEYQRLLE VEDLLQISDS 300 FC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 3e-63 | MYB family protein |