PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON92784.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family HB-other
Protein Properties Length: 376aa    MW: 41589.7 Da    PI: 7.2533
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON92784.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox19.91.3e-061374655
                S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHH CS
    Homeobox  6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRake 55
                +ft+++++e+e+  ++  n+ p +e    LA++            ++ +qV +WFqNrR+  
  PON92784.1 13 RFTPTEVTEMETILQEhnNSMPARELLVGLADRFseskerkgkiTVQMKQVWNWFQNRRYAI 74
                68999999999999965588999999999999999999999988999************865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MGRPPSNGGP AFRFTPTEVT EMETILQEHN NSMPARELLV GLADRFSESK ERKGKITVQM  60
KQVWNWFQNR RYAIRAKLSR NPGKLSVSSM PRDDPMPGRN VPQPFIAPIP APSVAGSGRS  120
ASENSIMEFE AKSGRDGAWY DVANFFSHRY LDTGDPEVLV RFAGFGPEED EWVNVRKHVR  180
QRSLPCESSE CVAVLPGDLI LCFQEGKEQA LYFDAHVLDA QRRRHDVRGC RCRFLVRYDH  240
DQSEEIVPLR KVCRRPETDY RLHQLHAVNE AASAEQQKSN MDSVAVNAPR AIIPAETIQR  300
QHNTDAASAA PVSLANAPFA TQASILEPKK AETSNVIGAG NSNTVPSGGN PITSGSLISN  360
TSVLSDDNMP EVKNIG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.31e-137HB-other family protein