PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON92757.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Protein Properties

Length: 911aa MW: 100329 Da PI: 7.078

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON92757.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.9	7.6e-18	325	424	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k l+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++l ++ PON92757.1 325 FEKMLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLKIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGKLIMG 421 89************************555566778***********99899999999.*******************876.77777777 PP EE- CS B3 96 vfr 98 +++ PON92757.1 422 FRK 424 766 PP

Sequence ? help Back to Top
Protein Sequence Length: 911 aa Download sequence
MSARMGCMNV ACGASTSIEW KKGWALRSGG YANLCDKCGN AYEQLVYCDV FHSAESGWRE 60 CISCGKRLHC GCIASRFLLE LLDSGGVKCL NCAKKSGSQP IISDDKPNGL GTSRVSELQH 120 ISSNDLLDGN SVDRIKLIQL SSDADGIGLK NLLQSQNEET NGLFRKMKQE DVQPSTGEVG 180 YFSNLNQGSN GSSEAAKAEF RKANIGSNDT YETLPHTNLT MTLGAPLGHS NPFPGAIVDE 240 REHSKTSSLF LQGARSRHLL PKPPRSAVGT SLEANTGMAP QVRVARPPAE GRGRNQLLPR 300 YWPRITDQEL QQISGDSNST IVPLFEKMLS ASDAGRIGRL VLPKACAEAY FPPISQPEGL 360 PLKIQDVKGK EWVFQFRFWP NNNSRMYVLE GVTPCIQSMQ LQAGDTVTFS RMDPEGKLIM 420 GFRKASTSVA MQETHPSAIP NGGHSSESFI SGVFENLPII SGHSGLLQSL KGSADTHLNA 480 LSKQLSSASA DISWNKIEKH EFRTRESLLL PSLLVPERKK ARNIGSKNKR LHIDSQDALE 540 LKLTWEEAQD LLRPPPAVKP STVMVEDHEF EEYEEPPVLG KRSIFIVRST GEQEQWTQCD 600 GCSKWRRLPV DVLLPYKWKC ADNAWDQSRC SCSAPDELTP REMESLLRLN KEFKKRRVAS 660 NNRPTQENES SGLDALANAA ILGDNAADPG TPSVATTTKH PRHRPGCSCI VCIQPPSGKG 720 KHKPSCTCNV CMTVKRRFKT LMMNKKKRQS EREAELANRN QKTWGPRDEA EVDSTSRHVS 780 SQLDPSDNET RSANESESKN QCMLAETTKE TLDLNCHPIR EEDSRAGSSR ISMMSLLQNA 840 SRPLDAYLKQ NGLTSLIQEQ QTSSSSQAPP QATNESEEQL NEDQCPASVA QEQESGSGEQ 900 CGQDQSQNDP L

Sequence ? help Back to Top

Protein Sequence Length: 911 aa Download sequence

MSARMGCMNV ACGASTSIEW KKGWALRSGG YANLCDKCGN AYEQLVYCDV FHSAESGWRE  60
CISCGKRLHC GCIASRFLLE LLDSGGVKCL NCAKKSGSQP IISDDKPNGL GTSRVSELQH  120
ISSNDLLDGN SVDRIKLIQL SSDADGIGLK NLLQSQNEET NGLFRKMKQE DVQPSTGEVG  180
YFSNLNQGSN GSSEAAKAEF RKANIGSNDT YETLPHTNLT MTLGAPLGHS NPFPGAIVDE  240
REHSKTSSLF LQGARSRHLL PKPPRSAVGT SLEANTGMAP QVRVARPPAE GRGRNQLLPR  300
YWPRITDQEL QQISGDSNST IVPLFEKMLS ASDAGRIGRL VLPKACAEAY FPPISQPEGL  360
PLKIQDVKGK EWVFQFRFWP NNNSRMYVLE GVTPCIQSMQ LQAGDTVTFS RMDPEGKLIM  420
GFRKASTSVA MQETHPSAIP NGGHSSESFI SGVFENLPII SGHSGLLQSL KGSADTHLNA  480
LSKQLSSASA DISWNKIEKH EFRTRESLLL PSLLVPERKK ARNIGSKNKR LHIDSQDALE  540
LKLTWEEAQD LLRPPPAVKP STVMVEDHEF EEYEEPPVLG KRSIFIVRST GEQEQWTQCD  600
GCSKWRRLPV DVLLPYKWKC ADNAWDQSRC SCSAPDELTP REMESLLRLN KEFKKRRVAS  660
NNRPTQENES SGLDALANAA ILGDNAADPG TPSVATTTKH PRHRPGCSCI VCIQPPSGKG  720
KHKPSCTCNV CMTVKRRFKT LMMNKKKRQS EREAELANRN QKTWGPRDEA EVDSTSRHVS  780
SQLDPSDNET RSANESESKN QCMLAETTKE TLDLNCHPIR EEDSRAGSSR ISMMSLLQNA  840
SRPLDAYLKQ NGLTSLIQEQ QTSSSSQAPP QATNESEEQL NEDQCPASVA QEQESGSGEQ  900
CGQDQSQNDP L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein