PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON92528.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 404aa    MW: 44939.2 Da    PI: 9.2377
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON92528.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-19222270355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+g
  PON92528.1 222 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAMAYDTAAYMLRG 270
                 8******9.**********955...5**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MEDQHPKMET FMPKGLMPSY FQGISTTGSS FFEYPNMLSA LTQPYYGPHE DRNGIVSRSL  60
SCSPDRILSG PESSNSSTDD QATNTTPEFI KLNTTNPPPS PLPFVPLNLF KVLDPKLTSS  120
RAQVSEPNSS KFPNLTLFSQ ESSMLDPSSA PFPTTQQVQP GIEWLKMTQN LSNFHQSKGF  180
NDYWLSTTKT QPMKNTGSSR RSSIPQSQNQ NQKSTFSSVK LFRGVRQRHW GKWVAEIRLP  240
RNRTRVWLGT FDTAEEAAMA YDTAAYMLRG DYAQLNFPDL KHQLKANSLN GTTAALLEAK  300
LQAISQGVGV SSSSNNNNNN DNKKSTNVVH DQLLSSPKKK KVSFESSKVN GLGQKQSKVG  360
CHDHENNTKR SHDCVSDVEA VQLSRMPSLD MDTIWDALLV SDTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.12e-54ERF family protein