PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON92433.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 301aa    MW: 33110.8 Da    PI: 5.7233
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON92433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.7e-20166216255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ taeeAa a+++a+ k++g
  PON92433.1 166 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEEAALAYDRAAFKMRG 216
                 7********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MIEAMLGEFS IPQYQYQFQY QYQYHNPTQY PNSTTSTTTL IPCLTEQWGD LPLQVNDSED  60
MIVYNSLTDA VNFGWSPSDH LTAAAAAVKA EPEYSLESLL EPAINYSQIN GQDRLVENSG  120
MIANPNEFFA FQSSANSADE NLNREAIKGF RGNNGNRRSS AARGRHYRGV RQRPWGKFAA  180
EIRDPAKNGA RVWLGTYETA EEAALAYDRA AFKMRGSKAL LNFPHRIGSG EPPPVRITAK  240
RREPESQGTG SGSGSGSGSP KKVKGLGPDD VESEKGLFGA FQVEVAHKMS FMPLGEDLLV  300
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.15e-44ERF family protein