PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON92380.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 283aa MW: 32838.9 Da PI: 6.7482

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON92380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	119.9	2.3e-37	58	185	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 lp+GfrF Ptd el+ +yL kkv++++l+ + i++vd+y++ Pw+L++ +++ +++ y+F++r+++ ++g+r+nrat +gy ka+gkd +++ + PON92380.1 58 LPKGFRFLPTDAELI-FYLLKKVRNDTLPP-NRIRDVDLYRFSPWHLEEmhTLHVSDRgARYYFTPRHRRCKKGNRPNRATVDGYYKASGKDVAIFF-R 153 799**********.9******999.77**********84234445666456********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 g+ +g k++Lvf+kg+ pkg ktdW+m+e+ l PON92380.1 154 GRIIGSKRSLVFHKGKFPKGDKTDWLMQEFML 185 99**************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MEVQITSNLE IHRNVIYPAH HVHVPSPMAE NDNYFPFTSS SSSSNVKEES NASYVDKLPK 60 GFRFLPTDAE LIFYLLKKVR NDTLPPNRIR DVDLYRFSPW HLEEMHTLHV SDRGARYYFT 120 PRHRRCKKGN RPNRATVDGY YKASGKDVAI FFRGRIIGSK RSLVFHKGKF PKGDKTDWLM 180 QEFMLEDAEQ RRKEGKDDDM KLDDWVLCKL YKRGHPETTK GKEMDIEDEE APVVRPSEEQ 240 DSPSPSLNQG HLDNVSLSDI VIDDDLDYIE SIFKSELAKK NGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08790.1	7e-43	NAC family protein