PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON92223.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Protein Properties

Length: 360aa MW: 40581.5 Da PI: 10.1547

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON92223.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	43.6	5.2e-14	78	154	15	97
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 +l lpkkf+ hg ++ s t+ l+ + g++We+ l k++g+++l++GW +F + +L+ g + F+++g+s f v+++ PON92223.1 78 LLELPKKFVWLHG--EALSSTVFLKLPCGQQWEIGL--LKSDGKVYLQQGWPKFTEHYQLDNGYLLYFRYEGNSHF--GVSIC 154 688*******9..55889************..********************************9988..66666 PP
2	B3	51.2	2.2e-16	264	357	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ffk+ ++ + ++ +l+lpk+f++ h + k ++++ + + W v+l k++++y+++kGW++F n L gD+++ +l++++++ l+v++f++ PON92223.1 264 FFKKVVRDHPSACYNLRLPKNFVDGHLERKD---QIVILQAGAKNWHVNL--LKCQSGYFFAKGWNKFLTGNSLHPGDVCIYELIEKNQALLKVSIFKR 357 788888888888888******99954433...5999999*****..*****************************999999***987 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MTRIEMLFQP RRRPENRSTA RKGHQNRSDT VDMEVGPAGE GAGALSDMRV QGLMNLPKWV 60 WFCSDWSVDP KFQQNVSLLE LPKKFVWLHG EALSSTVFLK LPCGQQWEIG LLKSDGKVYL 120 QQGWPKFTEH YQLDNGYLLY FRYEGNSHFG VSICGLSTCQ IEYPSIPTQS DGKLKVPSRK 180 EKTEEANSVT PPTSQAQKRM RTSATGMCPL GHVAGMKSQV SQKKTESGGS KFKISKTGSG 240 RTYKSYKDSR ALEAASSFSS PKPFFKKVVR DHPSACYNLR LPKNFVDGHL ERKDQIVILQ 300 AGAKNWHVNL LKCQSGYFFA KGWNKFLTGN SLHPGDVCIY ELIEKNQALL KVSIFKRNAV

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MTRIEMLFQP RRRPENRSTA RKGHQNRSDT VDMEVGPAGE GAGALSDMRV QGLMNLPKWV  60
WFCSDWSVDP KFQQNVSLLE LPKKFVWLHG EALSSTVFLK LPCGQQWEIG LLKSDGKVYL  120
QQGWPKFTEH YQLDNGYLLY FRYEGNSHFG VSICGLSTCQ IEYPSIPTQS DGKLKVPSRK  180
EKTEEANSVT PPTSQAQKRM RTSATGMCPL GHVAGMKSQV SQKKTESGGS KFKISKTGSG  240
RTYKSYKDSR ALEAASSFSS PKPFFKKVVR DHPSACYNLR LPKNFVDGHL ERKDQIVILQ  300
AGAKNWHVNL LKCQSGYFFA KGWNKFLTGN SLHPGDVCIY ELIEKNQALL KVSIFKRNAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-33	B3 family protein