PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON91812.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Protein Properties

Length: 291aa MW: 33467.6 Da PI: 5.3436

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON91812.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.7	5.7e-15	106	201	1	93
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+l +sdv+ gr+v+pkk ae h +++++e++ l l d + ++W+vk++y +++s++yv++ ++k Fv+a gL + D ++ + d+ +++++v PON91812.1 106 FEKQLQNSDVSPAGRIVIPKKVAEMHlpQLETKEGTWLHLDDMDFfQVWSVKFRYwpNNSSRMYVFE-NTKVFVSAYGLAVDDYIMVYKDD-DNESYV 201 99***********************9888889999999996667*****888888889999.***************999443.444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MADYSEISVN QVVYGDHAQS SAADNYDQLM MELASHLNHP LEGTGRTSSR PVIENQGRIR 60 PHTRDARDSS NRPLVYQPPR TPRVPIVAPP SPPPRVINQL KMRFLFEKQL QNSDVSPAGR 120 IVIPKKVAEM HLPQLETKEG TWLHLDDMDF FQVWSVKFRY WPNNSSRMYV FENTKVFVSA 180 YGLAVDDYIM VYKDDDNESY VIRAKKSMVS VMDIPAEYNT LQNMNMNNII NQPPAVNEYD 240 NWLPPIYHSR ENSQLYGNPM EFHGGVQPAG FEQVDQYPNS DFDFVNFSPF G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26790.1	2e-40	B3 family protein