PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON91653.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 370aa    MW: 40383.1 Da    PI: 5.7955
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON91653.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.5e-08214261455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++iN ++  L++l+P +    +k    a +L + +++++sLq
  PON91653.1 214 SHSLAERARREKINARMKLLQDLVPGC----NKISGTALVLDEIINHVQSLQ 261
                 8*************************9....888999999999999999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MEIPAAVTLT GPGSVGVGSR NGESGFDSVQ FGEEIQRLMT VPPESASSFT ALLELPATQA  60
MELLHHGPDS GGAPGKVAPS VSGDALCKPY SHPYSSNLTF LSDPALIERA AKFSVFAGEH  120
SPETSSVPSN SSANLEKVKN EPMETDSNPN SSQPLVSDPV VEEKSQSQRP SVKRKEREKK  180
AKGSSKKSKN ESSEDAEKLP YVHVRARRGQ ATDSHSLAER ARREKINARM KLLQDLVPGC  240
NKISGTALVL DEIINHVQSL QRQVEFLSMR LAAVNPRIDF NLDSILATDN GSVMEGNLPG  300
MVSPLMWPEF PINGNRQQYQ QEWHFDALHQ PLWGREEDSH TFVTPENSLL TYDSSANSAS  360
LHSSQLKMEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.21e-95bHLH family protein