PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON91648.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 392aa MW: 42792.3 Da PI: 8.3021

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON91648.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.9	7.6e-13	320	365	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L +AveYIk+Lq PON91648.1 320 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKDLQ 365 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MDSNTHQGFS HQNHQPNSGL LRFRSAPSSL FVNFTGSGDC GVNKNNSMEG SESERLFSRF 60 VDYTSGNNGS ESSPTFHDLD DKSAVMAAQQ RFSTGLPPHY PRQSSSTGGS GMDNGSFGLV 120 GSMAMDSQTQ AKSVNSSLVR QSSSPAGLFS HISVPNGYAA IKGAGNYGGL NGSHGEVSPS 180 TNRLKSQLSF SSRLPSLGVL SQISEVENES FEANTLDEEK LGNDNGVARF CGSGFTFGSW 240 NDSSNFSESV GGLRRDQDNN RKLCSSTQND ELGNRIHVLS HHLSLPKNST DVAMEKFLHF 300 QDSVPCKVRA KRGCATHPRS IAERVRRTRI SERMRKLQEL VPNMDKQTNT ADMLDLAVEY 360 IKDLQKQFKT LSDNRANCKC LNMQKPITNQ VV

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MDSNTHQGFS HQNHQPNSGL LRFRSAPSSL FVNFTGSGDC GVNKNNSMEG SESERLFSRF  60
VDYTSGNNGS ESSPTFHDLD DKSAVMAAQQ RFSTGLPPHY PRQSSSTGGS GMDNGSFGLV  120
GSMAMDSQTQ AKSVNSSLVR QSSSPAGLFS HISVPNGYAA IKGAGNYGGL NGSHGEVSPS  180
TNRLKSQLSF SSRLPSLGVL SQISEVENES FEANTLDEEK LGNDNGVARF CGSGFTFGSW  240
NDSSNFSESV GGLRRDQDNN RKLCSSTQND ELGNRIHVLS HHLSLPKNST DVAMEKFLHF  300
QDSVPCKVRA KRGCATHPRS IAERVRRTRI SERMRKLQEL VPNMDKQTNT ADMLDLAVEY  360
IKDLQKQFKT LSDNRANCKC LNMQKPITNQ VV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	1e-95	bHLH family protein