PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON91453.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 280aa    MW: 32153.3 Da    PI: 9.3936
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON91453.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.12.1e-051812201155
                 HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +R +++ +++  L++l+ +      +K + a++L++A  YIk Lq
  PON91453.1 181 KRSQKLTDKITALQKLVSPY-----GKTDTASVLQEASLYIKLLQ 220
                 6889**************99.....9****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MKNAILPSVS THYDFGSINY ELQIFNENLH SSSSFFMEPI PKALDNENQQ RSAEGYSFPF  60
QSSPLVSHQQ AAYPSTSLSR DVIDNISHQQ SLLLGKKILA PQFEVDFQAI QNTRKRPIED  120
NDILPRSGTN WEPRSERTNL NEYWGKNKRS KVTNNDQEWQ LQQLQEALSG MQEHKLQVPV  180
KRSQKLTDKI TALQKLVSPY GKTDTASVLQ EASLYIKLLQ EQIQNLFRMM CSSYDNVRGP  240
HSQAAGKRRL DLRSKGLCLV PISFTQKVSL DERIDKYARY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31730.17e-20bHLH family protein