PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON91393.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | bHLH | ||||||||
Protein Properties | Length: 168aa MW: 19265.8 Da PI: 9.6427 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.9 | 8.9e-09 | 58 | 105 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L++l+P + k + a +L ++ Y++sLq PON91393.1 58 SHSLAERVRREKINERLKCLQTLVPGC----YKTMGMAVMLDVVISYVHSLQ 105 8*************************8....345778888888888888887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MNFMTNNINI RSCFQFDDPN TSKTEKGTGR RKRKRNQSKD AAEEVIHVRA KRGQATDSHS 60 LAERVRREKI NERLKCLQTL VPGCYKTMGM AVMLDVVISY VHSLQNQIEF LSMKLSAASM 120 YYDSNSPNPN AINKLQVRNN AVNVEQEIDE NIENLGREGY GGFSYHFR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 29 | 37 | GRRKRKRNQ |
2 | 30 | 35 | RRKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25330.1 | 1e-48 | bHLH family protein |