PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON91265.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 628aa MW: 67534.7 Da PI: 6.9329

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON91265.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.8	1.5e-30	367	425	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ PON91265.1 367 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGNHNHP 425 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 628 aa Download sequence
MEKGWGLTLD SDSLGFFLNK QTQLPAVLDH HHHHHHHTAT KRPIFATVAT ADQSARPSSN 60 MFSAVEFNPA SRLGRRPEDH APPPPSDENR MSAAVVDFFA DKNRLVNDGD DSKSISAINV 120 KKENPHADAA TGPSLDVNTG LHLLTANTGS DQSTVDDGVS SDVEDKLNKT KVAQLQVELQ 180 RINAENQKLR EMLSHVTNNY NALQMHLMTV MQQQQQNHRA DTTQQPQNTN DPQEVKHERQ 240 FLDLGPSATA ETDDQVSNNS SSDERTRSAT PQNNILETAS KDNYVKYNST TSTTSKDVVP 300 FDQDQSSIGR RIGREESPES ESHGWAPNKV PKLNSGGGSK PIEQSADATM RKARVSVRAR 360 SEAPMITDGC QWRKYGQKMA KGNPCPRAYY RCTMAVGCPV RKQVQRCAED RTILITTYEG 420 NHNHPLPPAA MAMASTTTAA ANMLLSGSMS SADGLMNPNL LARAILPCSS SMATISASAP 480 FPTVTLDLTN NPNPLQMLRS QPTQFQVPLG QPQNFGTPPP GAPQSLPQVF GQALYNQSKF 540 SGLQLSSQEN MAGSSASQLQ LHQTQQPSLA DSVSAATAAI TADPNFTAAL AAAISSIIGG 600 ANPNSASAAA NANSNSNNSN KISSFPGN

Sequence ? help Back to Top

Protein Sequence Length: 628 aa Download sequence

MEKGWGLTLD SDSLGFFLNK QTQLPAVLDH HHHHHHHTAT KRPIFATVAT ADQSARPSSN  60
MFSAVEFNPA SRLGRRPEDH APPPPSDENR MSAAVVDFFA DKNRLVNDGD DSKSISAINV  120
KKENPHADAA TGPSLDVNTG LHLLTANTGS DQSTVDDGVS SDVEDKLNKT KVAQLQVELQ  180
RINAENQKLR EMLSHVTNNY NALQMHLMTV MQQQQQNHRA DTTQQPQNTN DPQEVKHERQ  240
FLDLGPSATA ETDDQVSNNS SSDERTRSAT PQNNILETAS KDNYVKYNST TSTTSKDVVP  300
FDQDQSSIGR RIGREESPES ESHGWAPNKV PKLNSGGGSK PIEQSADATM RKARVSVRAR  360
SEAPMITDGC QWRKYGQKMA KGNPCPRAYY RCTMAVGCPV RKQVQRCAED RTILITTYEG  420
NHNHPLPPAA MAMASTTTAA ANMLLSGSMS SADGLMNPNL LARAILPCSS SMATISASAP  480
FPTVTLDLTN NPNPLQMLRS QPTQFQVPLG QPQNFGTPPP GAPQSLPQVF GQALYNQSKF  540
SGLQLSSQEN MAGSSASQLQ LHQTQQPSLA DSVSAATAAI TADPNFTAAL AAAISSIIGG  600
ANPNSASAAA NANSNSNNSN KISSFPGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	1e-135	WRKY family protein