PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON91154.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 235aa MW: 26504.9 Da PI: 10.0854

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON91154.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.4	1.3e-32	156	214	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s +prsYYrCt+++C+vkk+v+r ++d+++v++tYeg Hnh+ PON91154.1 156 LDDGYRWRKYGQKAVKNSAYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHP 214 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MDGQKPPPPT TLPLQPPLTS LPLLTVLPQI NSPTFLFSPP SLPSSSSSSS LLLKNSNSNP 60 NPNPNPNLEI DWISLFSGQA SSRGIVTDEI MISSNTNRQK TISQNMSAST TTPLHENHEH 120 DHEEDKGNKM RRATGRMRKA ARPRFAFQTR SADDILDDGY RWRKYGQKAV KNSAYPRSYY 180 RCTHHTCNVK KQVQRLSKDT SIVVTTYEGI HNHPCEKLME TLTPLLRQMQ FLSSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41570.1	5e-59	WRKY family protein