PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON90988.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 244aa    MW: 26473.8 Da    PI: 7.3858
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON90988.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.6e-193988255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 ykGVr++  +g+WvAeIr+p   + r +r +lg+f+t  eAa a++aa++kl+g
  PON90988.1 39 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSREAAMAYDAAARKLYG 88
                69****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MLKSSIGFGE RKQVKKPAQA SSRKGCMRGK GGPENAMCTY KGVRQRTWGK WVAEIREPNR  60
GARLWLGTFD TSREAAMAYD AAARKLYGSD AKLNLPHELV SSSSSTSSLS LSQNKSRILA  120
QMSDQTALTA SPDRTHVSQN SDNNSGTTSK AAPISPVLND VVIPLCDDPY SNKENSVVVE  180
KDQVGRIDGL WGSMNASLPV FDDDAIWAEA AMSLDFPIME NHGIFGANIV DGTGWEALQS  240
PWCM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.16e-48ERF family protein