PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON90969.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TALE

Protein Properties

Length: 580aa MW: 65024.4 Da PI: 6.0451

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON90969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.1	8.5e-10	382	419	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+++e+ LAk++gL+++qV +WF N R + PON90969.1 382 FEHflHPYPKESEKVVLAKQTGLSTKQVANWFINARVR 419 664459******************************88 PP
2	BELL	114.7	4.6e-37	249	319	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +q+lq+kk+kL+++l+e+d+rYkqy++q+qtv+s + vag g+a+pYtslA+k+iSrhFrcL+dai++qi PON90969.1 249 QQDLQNKKTKLMTMLDEIDRRYKQYYHQMQTVMSFLDNVAGRGAAEPYTSLAQKTISRHFRCLRDAISGQI 319 689*******************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 580 aa Download sequence
MSTYVPNLGI KKCDLATTGY VDETYVTCPE PSLSQASSAG PFSMTFHNSS NYCVDSAEGR 60 NEMMFIPPIA TDPVGSSITG DSLVNQNVHY QGQGLSLSLG KQIPSPVSLT SFQYQYPNPS 120 LSTDLGTCLP SIGSNQNVEC FNMASGFLGM NNNSIKTEGF GNQVMQGDQR YEYESSGFDN 180 NFFNFKYLRA AQGLLDEVVN VRKALNKHQN KFQGMGSDGL KESDLKSNGP SDPSESTANS 240 SCELSPAKQQ DLQNKKTKLM TMLDEIDRRY KQYYHQMQTV MSFLDNVAGR GAAEPYTSLA 300 QKTISRHFRC LRDAISGQIQ AIQRRLGEQD NGQTSAIPRL RYVDLKLRQQ RGLNQLAAMR 360 HAWRPQRGLP ESSVSILRAW LFEHFLHPYP KESEKVVLAK QTGLSTKQVA NWFINARVRL 420 WKPMVEEMYK EEFNELEMNS KEAGVDSSSE DRREELNNPL QTQNRRLLEE GNVTDSETTK 480 SPADNHGVFL DDEAVRTTNQ ASYDDISELS SIVVRNNRRV SLALELRHCE SDGFSTLAGS 540 HMRGGGDESA AASLDYHCLE TEQQERRRFS NPHLLHDFVV

Sequence ? help Back to Top

Protein Sequence Length: 580 aa Download sequence

MSTYVPNLGI KKCDLATTGY VDETYVTCPE PSLSQASSAG PFSMTFHNSS NYCVDSAEGR  60
NEMMFIPPIA TDPVGSSITG DSLVNQNVHY QGQGLSLSLG KQIPSPVSLT SFQYQYPNPS  120
LSTDLGTCLP SIGSNQNVEC FNMASGFLGM NNNSIKTEGF GNQVMQGDQR YEYESSGFDN  180
NFFNFKYLRA AQGLLDEVVN VRKALNKHQN KFQGMGSDGL KESDLKSNGP SDPSESTANS  240
SCELSPAKQQ DLQNKKTKLM TMLDEIDRRY KQYYHQMQTV MSFLDNVAGR GAAEPYTSLA  300
QKTISRHFRC LRDAISGQIQ AIQRRLGEQD NGQTSAIPRL RYVDLKLRQQ RGLNQLAAMR  360
HAWRPQRGLP ESSVSILRAW LFEHFLHPYP KESEKVVLAK QTGLSTKQVA NWFINARVRL  420
WKPMVEEMYK EEFNELEMNS KEAGVDSSSE DRREELNNPL QTQNRRLLEE GNVTDSETTK  480
SPADNHGVFL DDEAVRTTNQ ASYDDISELS SIVVRNNRRV SLALELRHCE SDGFSTLAGS  540
HMRGGGDESA AASLDYHCLE TEQQERRRFS NPHLLHDFVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75410.2	1e-123	TALE family protein