PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON90548.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 344aa    MW: 37510.7 Da    PI: 6.9431
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON90548.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH331.1e-102663061055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  PON90548.1 266 RKRRERINERLKILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 306
                 9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MEPMGAEGQW TSLSGVHTAE EADFMALLLN NCSVPYHLNG TLPPLWPGHE STMNMAANYG  60
GSHCSLELSN SNMYSFSRGS SYSGGNSSTS NQFYLSDSHE QPILVKKNYH MINTEGEDCS  120
NNNREMSDGS LEVEGSKSSM EDKISNNVAA NGNSMKRARS SENVKVEKKH VKAKKKQKLV  180
STKLNYIKEE EGNTNVGANG QSSSSCSSGD DDSINGSQEM STTTTTTGTG GASSCLSPKG  240
PATLNSEGKT RARRGSATDP QSLYARKRRE RINERLKILQ NLVPNGTKVD ISTMLEEAVQ  300
YVKFLQLQIK LLSSDELWMY APIAYNGKDI GLDHLNLTMM TKQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-53bHLH family protein