PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON90547.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 368aa    MW: 40603.6 Da    PI: 4.948
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON90547.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH322.2e-102903301055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r+RR++iN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  PON90547.1 290 RKRREKINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 330
                 9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    
MEPILRAISA GEWSSFNGIY SSEEGDHNDH HQFMAADHHF LVDCGVPNDD QLAIGASSLD  60
DQIPFTLWPG TNYSHCSNIS EIDNSYPCSF SQGMVSSSTY SYPVTWLTSN SSEAFPEECR  120
NENLFLIEAE HNHKWPSQEA SSGAINEEEF GGNQPTAAAD HFPQVKWECD QMTAPESAME  180
TRSLSENSKK RSRSPTGGEP KNKRNVNSRK NQKLALMSDN EEDSCSAGTN KGPSSNSSFS  240
GDQHSNSSHD EELGGRDSSL SPKGPGALNL SGKARATRGS ATDPQSVYAR KRREKINERL  300
RILQNLVPNG TKVDISTMLE EAVQYVKFLQ LQIKLLSSDD LWMYAPLAYN GMDMGMGLDH  360
LRLAALRQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1290295RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.16e-60bHLH family protein