PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON89461.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 263aa MW: 29596.1 Da PI: 6.1651

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON89461.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv+ + +G +W+++++ g++R++k+c++rw +yl PON89461.1 14 KGPWTAEEDKKLVNFILTHGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	50.9	3.6e-16	72	111	6	47
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + E++l +d++++lG++ W++Ia++++ gRt++++k++w+++ PON89461.1 72 EAEEQLVIDLHARLGNR-WSKIAAKLP-GRTDNEIKNHWNTH 111 67*************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MGRQPCCDKL GVKKGPWTAE EDKKLVNFIL THGQCCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL NEAEEQLVID LHARLGNRWS KIAAKLPGRT DNEIKNHWNT HIKKKLVKMG 120 IDPVTHEPLN HQSTPPNEEK PCAATNNNDQ HEEIADQENG IRGMTPIDSS KIISIRTEMN 180 SSTDESQPSD PNIFDDPLMS YLLSENFLED SSWNFPVSAS TTTGDNYSNF GVSSSEGSST 240 WLLGSNSKDL VSDDGDIWAW FLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22680.1	5e-90	MYB family protein