PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON89398.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

CPP

Protein Properties

Length: 764aa MW: 84343.9 Da PI: 8.1137

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON89398.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	45.5	1.5e-14	423	460	4	41
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 kgC+Ckks C ++YCeC+ ag++Cse+C CedC+N+ e PON89398.1 423 KGCKCKKSGCRRLYCECYGAGEYCSEDCACEDCRNHGE 460 89*********************************865 PP
2	TCR	45.7	1.3e-14	513	552	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gC Ck+skC kkYCeCf+a++ Cs++C+Ce+C+Nk PON89398.1 513 RHKRGCYCKRSKCEKKYCECFQANVGCSSRCRCEGCENKF 552 589***********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 764 aa Download sequence
MTEKICEKIF SSLSLQNLNP DPPTPYPYTH IALQSLLSLS LSLSRREQMD RSPDPNRNGA 60 PPPPPSSSSS SSLPTFISPT STANESPASE FFRNLSPLET RAGSRFNATL NSPDYLFTSH 120 PSSYTDPLFP HQDSRSRGFD TSPSVLETPA FDNQSYAPSS PYLYGHYTDP NDLDAFDDRN 180 IRTRLANLPL GPRVLDGNNN NNLNTNSAFE RESSTFQRAQ WSGTSGDFAS GTFQHNHGTR 240 RQLQFGTDAR TNSNGSSSFN GLSRNTINVR PHIRVANFSS LLSPNVGEGR ASSSQLAVNS 300 VQYTHSQTMN ASSDVFGSRH RGGGCFAEDS NTSFSSSVCG ETSNHVNNYQ QERPAVIEAR 360 SLPLHPVRST TPYGGPLHLT LNEQPILPCG SMLPWQDIDR VDESYQESPK RKRLRATNTT 420 GGKGCKCKKS GCRRLYCECY GAGEYCSEDC ACEDCRNHGE YAMEIIEEKA QVQARNPQAF 480 VPKVVMDGTD SPANTREEGT KASAKEVAIA RKRHKRGCYC KRSKCEKKYC ECFQANVGCS 540 SRCRCEGCEN KFGKRPETMN CRAEVQNNPS NENMYSLMDQ IDVTETGTRN TNQSSTREVE 600 AMSCFTTPIY KTSVERSSIE TTSSPSDGRD FSTVSRSKWH PGNHLHEPSA TGFAHQRSRL 660 HSLTPQSNRS NTSFGVYGGL QDIMHNAIDQ PEHISNPIDA VQATPPNQRE VFSSQQLQSN 720 RPSSSSLLPD SRTQRKSSSS PLPGSRTQRK LVLKNIPPFG SLTP

Sequence ? help Back to Top

Protein Sequence Length: 764 aa Download sequence

MTEKICEKIF SSLSLQNLNP DPPTPYPYTH IALQSLLSLS LSLSRREQMD RSPDPNRNGA  60
PPPPPSSSSS SSLPTFISPT STANESPASE FFRNLSPLET RAGSRFNATL NSPDYLFTSH  120
PSSYTDPLFP HQDSRSRGFD TSPSVLETPA FDNQSYAPSS PYLYGHYTDP NDLDAFDDRN  180
IRTRLANLPL GPRVLDGNNN NNLNTNSAFE RESSTFQRAQ WSGTSGDFAS GTFQHNHGTR  240
RQLQFGTDAR TNSNGSSSFN GLSRNTINVR PHIRVANFSS LLSPNVGEGR ASSSQLAVNS  300
VQYTHSQTMN ASSDVFGSRH RGGGCFAEDS NTSFSSSVCG ETSNHVNNYQ QERPAVIEAR  360
SLPLHPVRST TPYGGPLHLT LNEQPILPCG SMLPWQDIDR VDESYQESPK RKRLRATNTT  420
GGKGCKCKKS GCRRLYCECY GAGEYCSEDC ACEDCRNHGE YAMEIIEEKA QVQARNPQAF  480
VPKVVMDGTD SPANTREEGT KASAKEVAIA RKRHKRGCYC KRSKCEKKYC ECFQANVGCS  540
SRCRCEGCEN KFGKRPETMN CRAEVQNNPS NENMYSLMDQ IDVTETGTRN TNQSSTREVE  600
AMSCFTTPIY KTSVERSSIE TTSSPSDGRD FSTVSRSKWH PGNHLHEPSA TGFAHQRSRL  660
HSLTPQSNRS NTSFGVYGGL QDIMHNAIDQ PEHISNPIDA VQATPPNQRE VFSSQQLQSN  720
RPSSSSLLPD SRTQRKSSSS PLPGSRTQRK LVLKNIPPFG SLTP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-33	CPP family protein