PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON89292.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 351aa    MW: 39079.7 Da    PI: 8.7861
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON89292.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.29.4e-30191250159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rs ed++v++ tYegeHnh+
  PON89292.1 191 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCPVKKKVQRSVEDQSVLVATYEGEHNHP 250
                 58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MLNFLGQFEA FGARNLAWNS VKNEEGEVGS FSKAMDYTSY VDTSLDLNTK PLRVLYDSPK  60
KEVETKFIDF GKKFAAKEET GALVEELNRV SSENKKLTEM LTVMCENYNT LRSQLTEYMN  120
KNPAEKELSP SKKRKSGSSN NNSTNILGNN GNSESSSTDE ESCKKPREEP IKAKVWKTCV  180
RTEASDTSLI VKDGYQWRKY GQKVTRDNPS PRAYFKCSFA PSCPVKKKVQ RSVEDQSVLV  240
ATYEGEHNHP QPSQLEATSG SNRCMALSSV PCSTNFISSS GPNITLDFTK PKSGNDTKTA  300
AKPARTDSPD VRQFLVEQMA SSLTKDPNFT AALAAAISGR IYQERNPTEK W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-102WRKY family protein