PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON89232.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 426aa MW: 46641.6 Da PI: 6.9447

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON89232.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.9	1.6e-12	359	404	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ k + a++L +AveYIk+Lq PON89232.1 359 SIAERVRRTRISERMRKLQELVPNM----EKQTNTADMLDLAVEYIKDLQ 404 689*******************7....467***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MESDLQHPQQ MSSGPGLMRY RSAPSSYFTN MLDREFCQQF FNRPSSPETE RIFARFMNSD 60 SGGLDDTTAQ KLSSETTQQT RFVTSTTMGN EAGAGAGTGA GAVAHQQQQQ QQSNLNSYSS 120 GSQSFNYHSQ SKPPLPNQSL GPSNEGSYSM GMNQFPPMRT GGLNNSTLIR HSSSPAGLFA 180 NINIEGLGAI RGMGSYGASS STNEEATFST PNKLKNFSSG PPNTSAGLMS PIDEIIDDKT 240 MVVNNQDGGA FGEGRGNNYV SSYPSLGSWD DSAIISDDIT GLKRLREEDE KPFSGLNTNL 300 PSETQNVETV TRPPTMLAHH LSLPKTSSEM AAIEKFLQFQ DSVPCKIRAK RGCATHPRSI 360 AERVRRTRIS ERMRKLQELV PNMEKQTNTA DMLDLAVEYI KDLQKQVQTL SDNRAKCTCS 420 NKHQQQ

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MESDLQHPQQ MSSGPGLMRY RSAPSSYFTN MLDREFCQQF FNRPSSPETE RIFARFMNSD  60
SGGLDDTTAQ KLSSETTQQT RFVTSTTMGN EAGAGAGTGA GAVAHQQQQQ QQSNLNSYSS  120
GSQSFNYHSQ SKPPLPNQSL GPSNEGSYSM GMNQFPPMRT GGLNNSTLIR HSSSPAGLFA  180
NINIEGLGAI RGMGSYGASS STNEEATFST PNKLKNFSSG PPNTSAGLMS PIDEIIDDKT  240
MVVNNQDGGA FGEGRGNNYV SSYPSLGSWD DSAIISDDIT GLKRLREEDE KPFSGLNTNL  300
PSETQNVETV TRPPTMLAHH LSLPKTSSEM AAIEKFLQFQ DSVPCKIRAK RGCATHPRSI  360
AERVRRTRIS ERMRKLQELV PNMEKQTNTA DMLDLAVEYI KDLQKQVQTL SDNRAKCTCS  420
NKHQQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	6e-66	bHLH family protein