PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88894.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 265aa    MW: 30245.9 Da    PI: 6.5136
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88894.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.94.2e-1480132155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 ++ +hn+ Er RR++iN+ ++ Lr+llP  +   + kKls  +++ ++ +YI +Lq
  PON88894.1  80 KKLNHNASERDRRKKINHLYSSLRTLLPAsD---HMKKLSIPATVSRVLKYIPELQ 132
                 6789*************************55...8888***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MLALSPPLFS TNIGWPLEDP IGHEEQNYFF RDIETTSDHQ SLYLNFPTPP TSDQRPPSEF  60
DHSATPSNYT TINSDLSMVK KLNHNASERD RRKKINHLYS SLRTLLPASD HMKKLSIPAT  120
VSRVLKYIPE LQQQVEGLVR KREELLSKLN STKQGINNQI HHQEINQIQT TARTSLSSVS  180
ASQLNDNEVA IQVSTYKVHK NQLSEMLHNL EEDGLSLLNA SSFESFGGRV FHNLHLQVEG  240
SYSMEYGTLE NKLMSLYANK EELYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.14e-55bHLH family protein