PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88891.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 249aa    MW: 28260 Da    PI: 8.4162
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88891.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.55.8e-1477129155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++ +hn+ Er RR++iN  ++ Lr+llP a   + kKls  ++  ++ +YI +Lq
  PON88891.1  77 KKLSHNASERDRRKKINCLYSSLRSLLPAA--DQMKKLSNPATISRTLKYIPELQ 129
                 6789*************************6..49999***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MLALYAPSPS AINGMAFDQE YRTNDLADSS PFHHLDLPYL QQQQQQQQQL QLLQGEVAEL  60
DPSPPSTAVT GDPTIIKKLS HNASERDRRK KINCLYSSLR SLLPAADQMK KLSNPATISR  120
TLKYIPELQN QVQGLIQKKE ELLSSISRKV DLIYQERHKK SSAWRSLSNV SASRLNDREL  180
VLQISTFKVQ KTPLSHILVD LEEDGFSLLN ATSFESFGGR VFYSLHLQVE RITDMKSTNN  240
LNENFLSPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-57bHLH family protein