PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON88464.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 481aa MW: 52888.5 Da PI: 7.5578

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON88464.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	92	4.7e-29	112	169	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK vkg+e+ rsYYrCt+++C vkk++ers+ ++k+v+i+ g+H+h+k PON88464.1 112 EDGYNWRKYGQKLVKGNEYVRSYYRCTHPNCLVKKQLERSH-EGKIVDIIHFGRHDHPK 169 7**************************************.*************85 PP
2	WRKY	105.3	3.3e-33	289	347	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+vkg+++prsYYrC+ +gCpvkk+ver+++d+kvv+ tYeg+Hnh+ PON88464.1 289 VNDGYRWRKYGQKMVKGNPNPRSYYRCSNSGCPVKKHVERASHDTKVVIATYEGQHNHD 347 58********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MVPLGESVKD EVPSDKPQPT ERSNTENLVS QEISITGISL LQSDKQGNLK GIETKNIESV 60 PDSAVDALIL NQQRKASPTI HQKASKSPET GGLALQSGQV STPTIVREKV SEDGYNWRKY 120 GQKLVKGNEY VRSYYRCTHP NCLVKKQLER SHEGKIVDII HFGRHDHPKP QLSVPVAVGF 180 VVSIVEEKRN ESPSFTTAEG TSVDEHRKPP AQTEHADTPQ TPNIAANDRS KATLSHSSKI 240 KDEVYIDDDP DSKRQKKDKH HLETTTVDKP NTTSEPRLVV QTLSEVDIVN DGYRWRKYGQ 300 KMVKGNPNPR SYYRCSNSGC PVKKHVERAS HDTKVVIATY EGQHNHDVPP GRIVTHNVSG 360 STVSPTARHG DTAAKSDGNA ASLDMVVDAI LEHESKPLNG ELRTRSAPKN PANSDMVIES 420 RPSPDNRSDK QQNGKSGVKE EIDFPENVPV ETSKGNSPSL TSRTNDKQNV DSEPSHGNGG 480 S

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MVPLGESVKD EVPSDKPQPT ERSNTENLVS QEISITGISL LQSDKQGNLK GIETKNIESV  60
PDSAVDALIL NQQRKASPTI HQKASKSPET GGLALQSGQV STPTIVREKV SEDGYNWRKY  120
GQKLVKGNEY VRSYYRCTHP NCLVKKQLER SHEGKIVDII HFGRHDHPKP QLSVPVAVGF  180
VVSIVEEKRN ESPSFTTAEG TSVDEHRKPP AQTEHADTPQ TPNIAANDRS KATLSHSSKI  240
KDEVYIDDDP DSKRQKKDKH HLETTTVDKP NTTSEPRLVV QTLSEVDIVN DGYRWRKYGQ  300
KMVKGNPNPR SYYRCSNSGC PVKKHVERAS HDTKVVIATY EGQHNHDVPP GRIVTHNVSG  360
STVSPTARHG DTAAKSDGNA ASLDMVVDAI LEHESKPLNG ELRTRSAPKN PANSDMVIES  420
RPSPDNRSDK QQNGKSGVKE EIDFPENVPV ETSKGNSPSL TSRTNDKQNV DSEPSHGNGG  480
S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G04880.2	4e-92	WRKY family protein