PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON88414.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

CPP

Protein Properties

Length: 439aa MW: 49183.2 Da PI: 9.0119

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON88414.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	46	1.1e-14	97	135	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++++C Ck++kClk+YCeCfa+g +Cs C+C dC+N+ e PON88414.1 97 HQRQCGCKQTKCLKLYCECFASGIYCSR-CNCVDCHNNIE 135 899**********************9.******976 PP
2	TCR	43.7	5.4e-14	182	220	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 kkgC+Ckk+ C kkYCeCf+a+ Cs CkC dC+N+e PON88414.1 182 YKKGCQCKKTLCRKKYCECFHANIPCSAYCKCLDCENHE 220 689**********************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MEISRQIQMK RRRGRYSGSR SRAKNLVKQL DFTLLGGLSS SVVASTSSSP DRFPSLANPS 60 LELHLSPPNP LFTEKIESSA SQLRAHAGKA DNSTLEHQRQ CGCKQTKCLK LYCECFASGI 120 YCSRCNCVDC HNNIENESMR NAAVESILER NRGAFRQRIA ESQHLTPDIK VLNKDTQFGG 180 KYKKGCQCKK TLCRKKYCEC FHANIPCSAY CKCLDCENHE GREERLVLSP KDCFDAETCV 240 RKANATAAAA IRLPGPTFCL VSSKREGQEP SGTIEKNTPI QVNPLTISGS PPPFSVSPLE 300 YREPSCFNSK FVLPVKSFTL EKQATEENRR AAVRGLKEKK NSQSPQDVRE MFLDDHMNEN 360 GVNTKLFKAA NVNGHKEMEF CDEKVTMLGG AASPNKNLKQ GHNVTNVCME QERLVLTNFR 420 DFLRRIISCG NMKGKIRVY

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MEISRQIQMK RRRGRYSGSR SRAKNLVKQL DFTLLGGLSS SVVASTSSSP DRFPSLANPS  60
LELHLSPPNP LFTEKIESSA SQLRAHAGKA DNSTLEHQRQ CGCKQTKCLK LYCECFASGI  120
YCSRCNCVDC HNNIENESMR NAAVESILER NRGAFRQRIA ESQHLTPDIK VLNKDTQFGG  180
KYKKGCQCKK TLCRKKYCEC FHANIPCSAY CKCLDCENHE GREERLVLSP KDCFDAETCV  240
RKANATAAAA IRLPGPTFCL VSSKREGQEP SGTIEKNTPI QVNPLTISGS PPPFSVSPLE  300
YREPSCFNSK FVLPVKSFTL EKQATEENRR AAVRGLKEKK NSQSPQDVRE MFLDDHMNEN  360
GVNTKLFKAA NVNGHKEMEF CDEKVTMLGG AASPNKNLKQ GHNVTNVCME QERLVLTNFR  420
DFLRRIISCG NMKGKIRVY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20110.1	4e-49	CPP family protein