PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88280.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 350aa    MW: 38888.7 Da    PI: 5.4998
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88280.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91e-175098355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+++++g
  PON88280.1 50 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 98
                56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MSTSKTLDKP FKGYEHSQPQ MGFAILQRNT SPTQPGERRG RRKQAEPGRF LGVRRRPWGR  60
YAAEIRDPTT KERHWLGTFD TAQEAALAYD RAALSMKGTQ ARTNFVYTDH NNTSFHSLHH  120
LSPFDVQTLL PPSQFICSTT TQSKQPTNQN SPPQPFMTCQ TETHTNQSNN DTFSETSYGS  180
SPPNHDDHDN NFFFSNDSNS GYLGCIVPDN CLRPPPPPSH DPKRSDFSTS NDQNFCSMST  240
NSAETKSHWD MMSEVVAPVP SSMASNPGEL MPCLDDYNVG FWDNNQQPWE LNSGDLSAMI  300
SSNIPLNEGD FYPLIDNSIF GLMSGPTSSV SCSPSVPPFG DAVDLGHSLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.12e-56ERF family protein