PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON88053.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | bHLH | ||||||||
Protein Properties | Length: 244aa MW: 27758.6 Da PI: 7.9788 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.1 | 2.1e-10 | 67 | 117 | 1 | 53 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 r++ h e+Er+RR+++ + f Lr+llP + ++K s + +Av+YI PON88053.1 67 RKVIHREIERQRRQEMTHLFVSLRSLLPLEF--IKGKRSIPDHINEAVRYIIL 117 6788*************************65..******************65 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MFPIREGSDQ LSSTYVSFNP NENLLISEDL ILSQVSTDDV RNDNNTTGKG RRRKLTDQNS 60 TLHNEKRKVI HREIERQRRQ EMTHLFVSLR SLLPLEFIKG KRSIPDHINE AVRYIILLKK 120 KIEELEGRRN EKKFNLSKLD GSEVSGNSKS FPPSFFTISP SCGGIEIVIS SSDTESEGAL 180 PVSRVMKVLL EQGLGIFSCI STKVNANMIV HTIQSEVCDF TCIDQNELQQ RLSEVNLSLR 240 YMTL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 66 | 79 | KRKVIHREIERQRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 9e-25 | bHLH family protein |