PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88052.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 268aa    MW: 29610.5 Da    PI: 9.4183
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88052.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.22e-1088137455
                 HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                  h  +Er+RR+++ +  + Lr+llP  +    ++K s ++   +A +YIk+Lq
  PON88052.1  88 RHRDIERQRRQEMATLHASLRSLLPLeL---IKGKRSISDHIHEAARYIKQLQ 137
                 699***********************78...*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MFPLHRSNEL CFQISPNPQK KNTISSEDLI LGHASLEDNA FHVSNYKNIN SHRNPRSLPK  60
SNGTIVNHNS TTTTTQNSGD SKNKKMMRHR DIERQRRQEM ATLHASLRSL LPLELIKGKR  120
SISDHIHEAA RYIKQLQMRI KELGNKRDYL KKYYLSNSSS TGPTDNGGAG SSSGSTPPPA  180
QGHLLRVQTC CGGVEIMVSN SDFAGDQASG LPLSRVLEVI LEEGLSLVSC VSTKVNGRLL  240
HTVHSEASNI ECINLSALEQ KLSEVIYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.16e-41bHLH family protein