PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON88016.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 340aa MW: 38286.9 Da PI: 6.1922

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON88016.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.1	1.7e-32	57	111	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtp LH+rFv+av+qLGG++kAtPk++l++m+vkg+tl+h+kSHLQkYRl PON88016.1 57 KPRLRWTPHLHARFVDAVNQLGGPQKATPKSLLRIMGVKGITLYHLKSHLQKYRL 111 79****************************************************8 PP
2	Myb_DNA-binding	58	2.1e-18	59	110	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+ ++ ++vdav+qlGg+ t+k+ r mg kg tl+++ks++qky+ PON88016.1 59 RLRWTPHLHARFVDAVNQLGGPqkaTPKSLLRIMGvKGITLYHLKSHLQKYR 110 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MGSYEHTAIK NEQTSERPQT PDGTHFEKAA AEGDEEESEL SSEAQAVSEV VLTADLKPRL 60 RWTPHLHARF VDAVNQLGGP QKATPKSLLR IMGVKGITLY HLKSHLQKYR LGKHSMKEWN 120 QVPTKGISGS LDTTISSGRL PSYRDEEKEL VNGKLEVQKE IQEKLLLQMQ ASLLSDSFLL 180 AEKRLQMCQE AERRYFNNAF GTACKMLANQ YAIGATADTG NVFEQDVNRL ETTVSIQPFY 240 QQEQYPAYHS SMPFNMAFRL QEKAGSFQLP RETQFVTGDS LSSHGHFGSF SSESFPLLAQ 300 GWNKRGQNLD EDPTETYLVL DNTEIGKSRV FNFDGVNNIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.2	1e-40	G2-like family protein