PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON87843.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 467aa    MW: 51695 Da    PI: 5.309
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON87843.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.2e-19215265256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  PON87843.1 215 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAALAYDREAYKLRGE 265
                 59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    
MATAKNSGKS KKVVDETQKL SQMEIDDRAK DLGFSLERRQ WKPVLDEASV SQRPLKKVRS  60
PERQDPYTQQ PSSFSVPPDS AQSVSLCPPN PSSSSSSGSR IVFPFAYDGS QPHPHFNKQV  120
LGTNLPVLPS PPLPQNPQNQ MISFASYQQS AMNYHPSFFS GAGAGDVQNQ QQLLQYWSDA  180
LNLSPRGRMM MMIGPDGRPF FRSPAPVQPI NTTKLYRGVR QRHWGKWVAE IRLPRNRTRL  240
WLGTFDTAED AALAYDREAY KLRGENARLN FPELFLNKDN NKSASSAGPS SSASSANREH  300
ESSQTVGHRN QPQAPEDQNF EASDSERMQP QPPPQDDNPD EDSGLGSSEA TASDEVQATP  360
MAAAEGSVVS QSQELVWGDM AEAWLNAIPA GWGPGSPVWD DLDANNNLLL QSNDLQFTNP  420
NLHELNQQPQ DIQLIRQCYG KFGPSSASSS SSSSYPMKPF FWKDQDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28140.18e-50ERF family protein