PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON87505.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 480aa MW: 53527.5 Da PI: 5.1166

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON87505.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38	2.9e-12	283	329	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + Er RR+++ ++++ L+ l+P++ +K + a+++ A+eYI++L PON87505.1 283 TKHFASERHRREQMSDKYQVLKNLVPNP-----TKSDRASVVGDAIEYIREL 329 78************************.....9**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MYVDDGSCSS FDPKNTPEAA AAASEDGFNS QLAPPPLPLP SLNSFSSAEN LRLAAEELPY 60 HQHQHLPHSQ EDAALDMELQ QQLAFNMENS YNIDINSTAQ LVSFDPHQQQ QQQPNWDNQD 120 MAYNNIHRHQ LQEPADLLNL FHLPRCSPSS SSLLPSSSSI TFANPTPKTA NFPSSSLAFL 180 GDVPIGMDSS SSSSALFDPL LHLNLPPQPP LFKDLFQSLP NGYAFPASAS RNGSFFSNGG 240 DIDGEGSGGI YQDEPDGMQF ENGVLEFTRD RARIDRGRDG RGTKHFASER HRREQMSDKY 300 QVLKNLVPNP TKSDRASVVG DAIEYIRELR RTVNELKILV EKKRRGIQSN KRQKAEEDNA 360 GEVENCNIKP DPDQSYIRSS WLQRKSKDTE VDVRIIDDEV TIKLVQRKKI NLLLIASRVL 420 DELQLDLRHV AGGHVGDTYS FLFNTKIYEG SSLYASAIAS KLIDILDRQF AAILPPISSY

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MYVDDGSCSS FDPKNTPEAA AAASEDGFNS QLAPPPLPLP SLNSFSSAEN LRLAAEELPY  60
HQHQHLPHSQ EDAALDMELQ QQLAFNMENS YNIDINSTAQ LVSFDPHQQQ QQQPNWDNQD  120
MAYNNIHRHQ LQEPADLLNL FHLPRCSPSS SSLLPSSSSI TFANPTPKTA NFPSSSLAFL  180
GDVPIGMDSS SSSSALFDPL LHLNLPPQPP LFKDLFQSLP NGYAFPASAS RNGSFFSNGG  240
DIDGEGSGGI YQDEPDGMQF ENGVLEFTRD RARIDRGRDG RGTKHFASER HRREQMSDKY  300
QVLKNLVPNP TKSDRASVVG DAIEYIRELR RTVNELKILV EKKRRGIQSN KRQKAEEDNA  360
GEVENCNIKP DPDQSYIRSS WLQRKSKDTE VDVRIIDDEV TIKLVQRKKI NLLLIASRVL  420
DELQLDLRHV AGGHVGDTYS FLFNTKIYEG SSLYASAIAS KLIDILDRQF AAILPPISSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	2e-67	bHLH family protein