PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON87305.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 360aa MW: 41108.2 Da PI: 9.9283

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON87305.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	93.8	1.4e-29	108	161	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +F++av++LGG+ekAtPk +l+lm+v gL+++hvkSHLQ++R+ PON87305.1 108 PRLRWTPDLHLSFLHAVDKLGGPEKATPKLVLQLMNVRGLSIAHVKSHLQMHRS 161 8****************************************************7 PP
2	Myb_DNA-binding	46.4	9.3e-15	109	160	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +++av +lGg+ t+k++ + m+ g++ ++ks++q+++ PON87305.1 109 RLRWTPDLHLSFLHAVDKLGGPekaTPKLVLQLMNvRGLSIAHVKSHLQMHR 160 89***********************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MRETINDKPI EMCTNIFDHH DEEKHIAENA SSFDLNEEAN SNSTSTQYDH ENIDDIKYFS 60 SSTSSTTAKV AKIFNTGADN GKLICGNSSA NRGKGGRVLR QYVRSKMPRL RWTPDLHLSF 120 LHAVDKLGGP EKATPKLVLQ LMNVRGLSIA HVKSHLQMHR SKKLDDHQAG HLALFQTYRP 180 KHERNSKQHR RLIEKRGTDF HQNIPKELNL VHSLLRSPVS PQNTSVFRSK GSDDQVEQMP 240 IKSDDATNNI TRAKAYNNSF QSLIHNIGSN RTMISKFLSN SYNTISIYGC KPNFDPFRNQ 300 NKMQLNWDQR VLKEEVPSPD LHLGLSQRES NKDEKMMTTQ NCRINQREID TKLSLSLSLS

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MRETINDKPI EMCTNIFDHH DEEKHIAENA SSFDLNEEAN SNSTSTQYDH ENIDDIKYFS  60
SSTSSTTAKV AKIFNTGADN GKLICGNSSA NRGKGGRVLR QYVRSKMPRL RWTPDLHLSF  120
LHAVDKLGGP EKATPKLVLQ LMNVRGLSIA HVKSHLQMHR SKKLDDHQAG HLALFQTYRP  180
KHERNSKQHR RLIEKRGTDF HQNIPKELNL VHSLLRSPVS PQNTSVFRSK GSDDQVEQMP  240
IKSDDATNNI TRAKAYNNSF QSLIHNIGSN RTMISKFLSN SYNTISIYGC KPNFDPFRNQ  300
NKMQLNWDQR VLKEEVPSPD LHLGLSQRES NKDEKMMTTQ NCRINQREID TKLSLSLSLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	7e-36	G2-like family protein