PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON87210.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 571aa MW: 60668.4 Da PI: 6.3838

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON87210.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.3	1e-30	304	362	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ PON87210.1 304 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 362 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MCSFLTFVPG NIIMDEHSNN HTSTDFQGDL IDIVRASGHG PGVGGGVLGA ASSSPNDSHH 60 HHHHHVVSGY EEELLITNNM ANNTAAAAWQ QQLYSSDPIM NCFGDPFSNM RDPLLHELNN 120 MSGVNSGLFG SPNSSSNDLV NGGGGGGGGD GFCGGANGLV GPSHHDHQEM KMMSSHHGSG 180 ISTSTSTSAR PSCNIFSRML QINPSSTTGS TNSKLPGGNT TSSHCDSALS PSPPPPITVA 240 SPRGINVNSS QGGCLVENNT TGGLQISSPR NPGIKRRKSQ GKKVVCIPAP AAASSRASGE 300 VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN 360 HPWPTQRNAL AGSTRSQPSK NTPSSTKNST PLGSQLQKSS TTTISSPKEE ADHYNKEMMM 420 MMNKNDNNAL SPIVVGAAGS TTSTASASVK EENVDDHHDD QDEIEKLDDQ LDDTSCHDHD 480 HDQFSSGEAV GLFPYRPAMP GPNLASADQD FFADLGEIEA DPLNLLFSQG LSSVDHHHQQ 540 QKGMVISKGL DPFNLFDWSG SAGDNNNNIN K

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MCSFLTFVPG NIIMDEHSNN HTSTDFQGDL IDIVRASGHG PGVGGGVLGA ASSSPNDSHH  60
HHHHHVVSGY EEELLITNNM ANNTAAAAWQ QQLYSSDPIM NCFGDPFSNM RDPLLHELNN  120
MSGVNSGLFG SPNSSSNDLV NGGGGGGGGD GFCGGANGLV GPSHHDHQEM KMMSSHHGSG  180
ISTSTSTSAR PSCNIFSRML QINPSSTTGS TNSKLPGGNT TSSHCDSALS PSPPPPITVA  240
SPRGINVNSS QGGCLVENNT TGGLQISSPR NPGIKRRKSQ GKKVVCIPAP AAASSRASGE  300
VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN  360
HPWPTQRNAL AGSTRSQPSK NTPSSTKNST PLGSQLQKSS TTTISSPKEE ADHYNKEMMM  420
MMNKNDNNAL SPIVVGAAGS TTSTASASVK EENVDDHHDD QDEIEKLDDQ LDDTSCHDHD  480
HDQFSSGEAV GLFPYRPAMP GPNLASADQD FFADLGEIEA DPLNLLFSQG LSSVDHHHQQ  540
QKGMVISKGL DPFNLFDWSG SAGDNNNNIN K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34830.1	2e-65	WRKY family protein