PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON87159.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 336aa    MW: 35614.1 Da    PI: 6.1684
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON87159.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.8e-10185229554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 h+++Er RR+ri +++  L+el+P++      K + a++L + v+Y+k L
  PON87159.1 185 HSIAERLRRERIAERMKALQELVPSC-----NKTDRAAMLDEIVDYVKFL 229
                 99***********************8.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MAGNPPESLG DDFFEQILAV PQSYTGGGSD VGSIPMVLQL GSGAGNVSGG GGGGGFRGVG  60
MGMGMGMPLG LNLEQGFLRH DRFRDEVEAN TNNNTSNNNN NLSSPVTGAS SGINERDSVH  120
MASLFPAFGH MQNQSVRATP PPPPPQLHQQ PYHVQPTAAP VAPAPQPPAI RPRVRARRGQ  180
ATDPHSIAER LRRERIAERM KALQELVPSC NKTDRAAMLD EIVDYVKFLR LQVKVLSMSR  240
LGGAGAVAQL VADVPLSSVE GGGTEGGESQ AAWEKWSTDG TEQQVAKLME EDVGAAMQFL  300
QSKALCIMPI SLASAIFRTH QPDPSTMVKP ESNNSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1190195RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.31e-54bHLH family protein