PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON87040.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 384aa    MW: 42523.4 Da    PI: 6.4756
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON87040.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.72.5e-14188234354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  PON87040.1 188 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 234
                 79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MMSCGKKLED EAECSKTIEN NIQGFQEQFL LHHQIMHHHH QQDHHQITSD HHHHIYNGAG  60
RSALIFPEVS PLLHPTAAWP LPPVHSFNPA HFGPNPVRDV HDPFLVPPPP PPSSSYASLF  120
NRRGGGAPSL QFTYDGTHHH PSSDHLRILS DTIGPVVQPV SSPFGLQAEL GKMTAQEIMD  180
AKALAASKSH SEAERRRRER INNHLAKLRS LLPSTTKTDK ASLLAEVIQH VKELKRQTSL  240
IAETSPVPTE TDELTVDDAS SDEDGRFVIK ASLCCEDRSD LLPDLIKTLK ALRLRTLKAE  300
ITTLGGRVKN VLFITGDEDS GGGADDDDED DDNQDQQSHH HHQFCISSIQ EALKAVIEKK  360
GSEDSSSGSV KRQRTTTNNI NIYP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1194199ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-84bHLH family protein