PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON87035.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TCP

Protein Properties

Length: 436aa MW: 48785.6 Da PI: 6.3475

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON87035.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	143.8	1.3e-44	104	256	2	137
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg............ 88 +gkkdrhski+T++g+RdRR+Rls+++a++fFdLqd+LGfdk+skti+WL++++k+ai el ++ ++ + +c+++++ ++ ++++ PON87035.1 104 TGKKDRHSKISTAQGLRDRRMRLSLQIARKFFDLQDMLGFDKASKTIDWLFTKSKAAIRELKDSLTKRS-SCSNNEDDGGGDDDGNDdddddvdedhdd 201 79************************************************************44444.66444444333333333456677788888 PP TCP 89 ......kaaksaakskksqksaasalnlakesrakarararertrekmriknkln 137 ++ ++ +kk++ ++ ++ ++akesr kar+rarertrek++++++ + PON87035.1 202 eilmgnVDMPGKEIRKKKNVRKLHHCKVAKESRDKARERARERTREKKMLQKSAQ 256 999998555555545555555555899******************99997765 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MPSKQLENID DDHHHHQNPN SNQEYYSHLP TIFEDDGVML SHLLSQKQLL LASASTTTTA 60 TTSHNDDMKI TNSSSKGFLK KKQIIRGGGG AKTTAVNNST RRRTGKKDRH SKISTAQGLR 120 DRRMRLSLQI ARKFFDLQDM LGFDKASKTI DWLFTKSKAA IRELKDSLTK RSSCSNNEDD 180 GGGDDDGNDD DDDDVDEDHD DEILMGNVDM PGKEIRKKKN VRKLHHCKVA KESRDKARER 240 ARERTREKKM LQKSAQTSQK PQKNMVAGSE VSEHQHHDDV DSLSMCETFQ AESVADYYSS 300 MMMMMSSSSG ANSEDDFLGL FPPGNWELIN SSSKPQSFGH MNYKPLQIST TNTTSDIYEE 360 KPSSIFHTST SNTDTGEENP SSGFMAAETA AHNHEGEDPN PNHGPVFFST RTSTLISQIQ 420 DQDQLAGSNV FHGINF

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MPSKQLENID DDHHHHQNPN SNQEYYSHLP TIFEDDGVML SHLLSQKQLL LASASTTTTA  60
TTSHNDDMKI TNSSSKGFLK KKQIIRGGGG AKTTAVNNST RRRTGKKDRH SKISTAQGLR  120
DRRMRLSLQI ARKFFDLQDM LGFDKASKTI DWLFTKSKAA IRELKDSLTK RSSCSNNEDD  180
GGGDDDGNDD DDDDVDEDHD DEILMGNVDM PGKEIRKKKN VRKLHHCKVA KESRDKARER  240
ARERTREKKM LQKSAQTSQK PQKNMVAGSE VSEHQHHDDV DSLSMCETFQ AESVADYYSS  300
MMMMMSSSSG ANSEDDFLGL FPPGNWELIN SSSKPQSFGH MNYKPLQIST TNTTSDIYEE  360
KPSSIFHTST SNTDTGEENP SSGFMAAETA AHNHEGEDPN PNHGPVFFST RTSTLISQIQ  420
DQDQLAGSNV FHGINF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	6e-30	TCP family protein