PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON86570.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 374aa    MW: 39134.6 Da    PI: 8.1557
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON86570.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.3e-1878127255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a+  l+g
  PON86570.1  78 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFATAEDAARAYDRAAIILYG 127
                 59****999.**********954...5**********************88876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MDSSSTSSPP PPGGTGPHPN HSSNNNDKTT NNNFSDTDVA AAGASAGVGA SGDSGTGGKG  60
KGRGKGKGKG GPDNSKFRYR GVRQRSWGKW VAEIREPRKR TRKWLGTFAT AEDAARAYDR  120
AAIILYGSRA QLNLQPSGSS SHSSSRGSSS SGASSSSSTQ TLRPLLPRPS GFGLTYSPAA  180
VQLQTAAYTA AAASRFVPYG VGTVVGTACT TNLSVLMSSN STAHNNNNNN FQLQQYHQYP  240
PPDPHLGAVG GFCGGDQGGG GCGPTLTVPY PNPSGNHDQY RHHHHHGYDQ YQHHHQTAQI  300
NCSSYEDINS LAGAVDSGLS LCTQAMIGPG TVPDPVGAVG PVSPMMWPLV NDVECPPSVW  360
DYGDPLDFDY RGFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.16e-28ERF family protein