PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON86520.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TCP

Protein Properties

Length: 487aa MW: 55235.1 Da PI: 8.0508

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON86520.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	107.1	2.8e-33	180	338	3	131
TCP 3 gkkdrhskih..TkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........ssssasec.......eaesssssasn 84 +kkdrhski T + +R RR+Rls+e+a++fFdLqd+LG+ ++skt+eWLl +a ik+l+ + + e+++ +s+sn PON86520.1 180 VKKDRHSKIMmtTGKRPRHRRMRLSLEVARQFFDLQDMLGYERASKTVEWLLIKARSDIKKLAMEssttsptsP------TppgaggiEKKTTANSNSN 272 69****9644888899****************************************999554333220......2444444422222222222 PP TCP 85 sssg...................kaaksaakskksqksaasalnlakesrakarararertrekmr 131 s ++ +aa++++k++++ +++ + + +esr kar+rarert+ ++ PON86520.1 273 SPNNsdyevvssldevavdiskpSAANKEMKKRQAISRPRCGFKRPRESRDKARERARERTKLMKS 338 22224567888999999999987777777788888889999999999************96655 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MFPSNTWNIG NDPPISFSHD QSLISINKPY FLNETYNNIV INTTPNSKHQ FFYFPSSPLF 60 EEENLVSLSH HQNHHDHLLL HNSSSQPLFV RENNNNNDIL STTDKPHVVV STADEPHSNK 120 DNINNNINKL DPINPTNLQQ KQQQPRPDDL SDLRKNHIRH DDHDDQQQQQ QQIPRKRIMV 180 KKDRHSKIMM TTGKRPRHRR MRLSLEVARQ FFDLQDMLGY ERASKTVEWL LIKARSDIKK 240 LAMESSTTSP TSPTPPGAGG IEKKTTANSN SNSPNNSDYE VVSSLDEVAV DISKPSAANK 300 EMKKRQAISR PRCGFKRPRE SRDKARERAR ERTKLMKSKR DLLAVVNDDQ CVHLHDNQDL 360 TGHGLSSWSL ETGEEETRTQ SGQNNNSNNS LEAVVLQASS SSRHRHHHDH YGFEEPLTSC 420 WHNGQEQYRT CSSTASAAVA NLVEECSFLN MGKYYWSPSP SIPSIFNSLQ NAATSGSGGP 480 IPGQEVS

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MFPSNTWNIG NDPPISFSHD QSLISINKPY FLNETYNNIV INTTPNSKHQ FFYFPSSPLF  60
EEENLVSLSH HQNHHDHLLL HNSSSQPLFV RENNNNNDIL STTDKPHVVV STADEPHSNK  120
DNINNNINKL DPINPTNLQQ KQQQPRPDDL SDLRKNHIRH DDHDDQQQQQ QQIPRKRIMV  180
KKDRHSKIMM TTGKRPRHRR MRLSLEVARQ FFDLQDMLGY ERASKTVEWL LIKARSDIKK  240
LAMESSTTSP TSPTPPGAGG IEKKTTANSN SNSPNNSDYE VVSSLDEVAV DISKPSAANK  300
EMKKRQAISR PRCGFKRPRE SRDKARERAR ERTKLMKSKR DLLAVVNDDQ CVHLHDNQDL  360
TGHGLSSWSL ETGEEETRTQ SGQNNNSNNS LEAVVLQASS SSRHRHHHDH YGFEEPLTSC  420
WHNGQEQYRT CSSTASAAVA NLVEECSFLN MGKYYWSPSP SIPSIFNSLQ NAATSGSGGP  480
IPGQEVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	2e-20	TCP family protein