PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON86433.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family NF-YC
Protein Properties Length: 127aa    MW: 13833.7 Da    PI: 5.9982
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON86433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC97.88.8e-31181011898
       NF-YC  18 nhelPlarikkilk...adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 
                  h+lPlarikki+k   + ++vkmis eaPv+++kacelfi elt +sw  + + krr l+k d+a+av  td+fdflv  v  
  PON86433.1  18 AHSLPLARIKKIMKrsgSGDEVKMISGEAPVVFAKACELFIKELTQKSWTLTLQGKRRILHKDDVASAVVATDVFDFLVGLVSD 101
                 599***********4434589*********************************************************998875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MRQAGTYSGI RFGGGNGAHS LPLARIKKIM KRSGSGDEVK MISGEAPVVF AKACELFIKE  60
LTQKSWTLTL QGKRRILHKD DVASAVVATD VFDFLVGLVS DADGDGDDHD HHAQNLVPEE  120
RETVLEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.33e-23NF-YC family protein